This tutorial does not cover all the functions of PyMol, but tries to focus on the most important ones.Ī great resource for more advanced use is this wiki and the large number of good tutorials found online, which can be accessed via google. This tutorial is designed to give you a basic working knowledge of making pretty and informative pictures of protein structures using PyMOL. These homepages collect material from several sources, and present them in easy format. There exist homepages, to get more info about your protein. We need to find a Protein Databank File (PDB), which describe the x,y,z coordinates of your enzyme.įind a suitable file by searching for: porcine kidney fructose 1,6-bisphosphatase You don't have to follow the steps of extending PyMOL, but if you are a little technical, and want to become friends with PyMOL over time, then consider it.
Consider this little nice texteditor: Notepad++ If you want to read about PyMOL, then try this introduction Practical_Pymol_for_Beginners Install PyMOL to your computer We will only cover the very basic steps to get a image of your enzyme and put in your written student article. This is the very first introduction to the powerful molecular visualizer PyMOL.
This tutorial was written directly for biochemistry students at Copenhagen University, 2012/2013.
#PYMOL TUTORIAL X ANSWERS MOVIE#
9.1 Collect images and create movie in "Windows Live Movie Maker".8 Movie of Potassium Channel KcsA-Fab complex in high concentration of K+.
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